Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL13Q99616 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CCL13Q99616 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL13Q99616 AC145285.6-201ENST00000604632 637 ntBASIC15.71■□□□□ 0.11
CCL13Q99616 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCL13Q99616 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL13Q99616 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCL13Q99616 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL13Q99616 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCL13Q99616 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL13Q99616 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCL13Q99616 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCL13Q99616 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CCL13Q99616 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCL13Q99616 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL13Q99616 KRT8P32-201ENST00000512863 1461 ntBASIC15.71■□□□□ 0.1
CCL13Q99616 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL13Q99616 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCL13Q99616 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 BX323043.1-201ENST00000641006 1765 ntBASIC15.7■□□□□ 0.1
CCL13Q99616 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 MIR4674-201ENST00000582457 87 ntBASIC15.7■□□□□ 0.1
CCL13Q99616 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL13Q99616 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
CCL13Q99616 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 AC010653.2-201ENST00000623505 997 ntBASIC15.7■□□□□ 0.1
CCL13Q99616 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCL13Q99616 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL13Q99616 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL13Q99616 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL13Q99616 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCL13Q99616 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL13Q99616 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCL13Q99616 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 MCCD1P1-208ENST00000445732 328 ntBASIC15.69■□□□□ 0.1
CCL13Q99616 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL13Q99616 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL13Q99616 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCL13Q99616 LINC01023-201ENST00000606054 436 ntBASIC15.69■□□□□ 0.1
CCL13Q99616 FAM87A-204ENST00000613235 858 ntBASIC15.69■□□□□ 0.1
CCL13Q99616 AC083906.6-201ENST00000641366 219 ntBASIC15.69■□□□□ 0.1
CCL13Q99616 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCL13Q99616 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL13Q99616 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL13Q99616 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL13Q99616 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCL13Q99616 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL13Q99616 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL13Q99616 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCL13Q99616 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
CCL13Q99616 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCL13Q99616 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCL13Q99616 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCL13Q99616 AC097493.4-201ENST00000641197 219 ntBASIC15.68■□□□□ 0.1
CCL13Q99616 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL13Q99616 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms