Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRGV9Q99603 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.64□□□□□ -0.07
TRGV9Q99603 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.64□□□□□ -0.07
TRGV9Q99603 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.64□□□□□ -0.07
TRGV9Q99603 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 AL445675.2-201ENST00000620291 557 ntBASIC14.64□□□□□ -0.07
TRGV9Q99603 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TRGV9Q99603 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 KRT8P11-201ENST00000409686 1436 ntBASIC14.64□□□□□ -0.07
TRGV9Q99603 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRGV9Q99603 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV9Q99603 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
TRGV9Q99603 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV9Q99603 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRGV9Q99603 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV9Q99603 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRGV9Q99603 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV9Q99603 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.63□□□□□ -0.07
TRGV9Q99603 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 AC131212.4-201ENST00000623606 975 ntBASIC14.63□□□□□ -0.07
TRGV9Q99603 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV9Q99603 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV9Q99603 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV9Q99603 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV9Q99603 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV9Q99603 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
TRGV9Q99603 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRGV9Q99603 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRGV9Q99603 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV9Q99603 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRGV9Q99603 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 AC239809.2-201ENST00000415381 517 ntBASIC14.62□□□□□ -0.07
TRGV9Q99603 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRGV9Q99603 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV9Q99603 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms