Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB40CQ96S21 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB40CQ96S21 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 PRORSD1P-202ENST00000563365 2154 ntBASIC15.21■□□□□ 0.03
RAB40CQ96S21 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 TUBB8P6-201ENST00000436895 1288 ntBASIC15.21■□□□□ 0.03
RAB40CQ96S21 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 KRT18P16-201ENST00000510337 1294 ntBASIC15.21■□□□□ 0.03
RAB40CQ96S21 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 AC005181.1-201ENST00000604782 1256 ntBASIC15.21■□□□□ 0.03
RAB40CQ96S21 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 MYC-208ENST00000641036 567 ntBASIC15.21■□□□□ 0.03
RAB40CQ96S21 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB40CQ96S21 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RAB40CQ96S21 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40CQ96S21 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB40CQ96S21 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.21■□□□□ 0.02
RAB40CQ96S21 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.21■□□□□ 0.02
RAB40CQ96S21 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40CQ96S21 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RAB40CQ96S21 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 RPS2P52-201ENST00000469610 820 ntBASIC15.2■□□□□ 0.02
RAB40CQ96S21 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 AC073111.5-205ENST00000641717 521 ntBASIC15.2■□□□□ 0.02
RAB40CQ96S21 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40CQ96S21 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.2■□□□□ 0.02
RAB40CQ96S21 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40CQ96S21 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 HEIH-201ENST00000623091 1652 ntBASIC15.19■□□□□ 0.02
RAB40CQ96S21 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 CDCA4P2-201ENST00000441182 718 ntBASIC15.19■□□□□ 0.02
RAB40CQ96S21 AC093787.1-201ENST00000450396 207 ntBASIC15.19■□□□□ 0.02
RAB40CQ96S21 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40CQ96S21 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40CQ96S21 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms