Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 WWOX-216ENST00000569818 525 ntBASIC15.58■□□□□ 0.08
GAFA1Q96PS6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 LINC01023-201ENST00000606054 436 ntBASIC15.58■□□□□ 0.08
GAFA1Q96PS6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.58■□□□□ 0.08
GAFA1Q96PS6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GAFA1Q96PS6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 ECEL1P3-201ENST00000427961 737 ntBASIC15.56■□□□□ 0.08
GAFA1Q96PS6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 AL512604.3-201ENST00000569583 964 ntBASIC15.56■□□□□ 0.08
GAFA1Q96PS6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GAFA1Q96PS6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GAFA1Q96PS6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms