Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 RCC2P3-201ENST00000418112 1537 ntBASIC19.84■□□□□ 0.77
TRIM11Q96F44 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM11Q96F44 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM11Q96F44 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 AC096733.2-201ENST00000609937 1394 ntBASIC19.83■□□□□ 0.77
TRIM11Q96F44 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM11Q96F44 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM11Q96F44 AC135050.7-201ENST00000624508 2218 ntBASIC19.83■□□□□ 0.77
TRIM11Q96F44 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM11Q96F44 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM11Q96F44 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM11Q96F44 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
TRIM11Q96F44 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM11Q96F44 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM11Q96F44 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM11Q96F44 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM11Q96F44 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM11Q96F44 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM11Q96F44 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM11Q96F44 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM11Q96F44 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
TRIM11Q96F44 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 AC012618.2-201ENST00000428058 849 ntBASIC19.82■□□□□ 0.76
TRIM11Q96F44 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 AC116562.2-201ENST00000507042 360 ntBASIC19.82■□□□□ 0.76
TRIM11Q96F44 NUDT16P1-203ENST00000513809 620 ntBASIC19.82■□□□□ 0.76
TRIM11Q96F44 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 KRT8P45-201ENST00000414328 1447 ntBASIC19.82■□□□□ 0.76
TRIM11Q96F44 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM11Q96F44 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM11Q96F44 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 AL357033.4-201ENST00000617703 1807 ntBASIC19.81■□□□□ 0.76
TRIM11Q96F44 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 GCSHP5-201ENST00000443090 522 ntBASIC19.81■□□□□ 0.76
TRIM11Q96F44 AC098590.1-201ENST00000468126 897 ntBASIC19.81■□□□□ 0.76
TRIM11Q96F44 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 AL109659.2-201ENST00000606809 1674 ntBASIC19.81■□□□□ 0.76
TRIM11Q96F44 BICD1-207ENST00000551848 1962 ntBASIC19.81■□□□□ 0.76
TRIM11Q96F44 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM11Q96F44 AC126763.1-201ENST00000552015 2118 ntBASIC19.81■□□□□ 0.76
TRIM11Q96F44 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
TRIM11Q96F44 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM11Q96F44 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM11Q96F44 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms