Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 SEC1P-202ENST00000473944 940 ntBASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 AC112497.1-201ENST00000624824 639 ntBASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 AC093525.10-201ENST00000625130 1569 ntBASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 HOMER2P1-201ENST00000455653 964 ntBASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.74■□□□□ 0.59
ECHDC3Q96DC8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 KRT18P23-201ENST00000435622 1283 ntBASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 AC024243.1-201ENST00000609234 778 ntBASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 AL590326.2-201ENST00000625139 305 ntBASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC3Q96DC8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 AC104390.1-201ENST00000555663 520 ntBASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 BX323043.1-201ENST00000641006 1765 ntBASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms