Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 UNC93B2-201ENST00000285383 730 ntBASIC19.3■□□□□ 0.68
HDAC11Q96DB2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 CA15P1-201ENST00000481698 905 ntBASIC19.3■□□□□ 0.68
HDAC11Q96DB2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC11Q96DB2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC11Q96DB2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 KRT17P2-201ENST00000300992 1314 ntBASIC19.28■□□□□ 0.68
HDAC11Q96DB2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 CRYGFP-201ENST00000418459 633 ntBASIC19.28■□□□□ 0.68
HDAC11Q96DB2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 MIR4497-201ENST00000583208 89 ntBASIC19.28■□□□□ 0.68
HDAC11Q96DB2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 MTMR9LP-203ENST00000426597 1545 ntBASIC19.28■□□□□ 0.68
HDAC11Q96DB2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 ANO7L1-203ENST00000602586 1720 ntBASIC19.28■□□□□ 0.68
HDAC11Q96DB2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.28■□□□□ 0.68
HDAC11Q96DB2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HDAC11Q96DB2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms