Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 HLA-A-209ENST00000638375 975 ntBASIC18.04■□□□□ 0.48
VPS33AQ96AX1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 OR6D1P-202ENST00000641007 5290 ntBASIC18.04■□□□□ 0.48
VPS33AQ96AX1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 AC067852.2-201ENST00000590513 2313 ntBASIC18.04■□□□□ 0.48
VPS33AQ96AX1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS33AQ96AX1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 FZD10-202ENST00000539839 3282 ntBASIC18.03■□□□□ 0.48
VPS33AQ96AX1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.03■□□□□ 0.48
VPS33AQ96AX1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 AC020916.1-201ENST00000587762 1774 ntBASIC18.03■□□□□ 0.48
VPS33AQ96AX1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS33AQ96AX1 AL499627.1-201ENST00000569373 2188 ntBASIC18.03■□□□□ 0.48
VPS33AQ96AX1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.02■□□□□ 0.48
VPS33AQ96AX1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS33AQ96AX1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS33AQ96AX1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS33AQ96AX1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms