Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF34Q969K3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF34Q969K3 AC092338.2-201ENST00000568827 1415 ntBASIC19.61■□□□□ 0.73
RNF34Q969K3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF34Q969K3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF34Q969K3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF34Q969K3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF34Q969K3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF34Q969K3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RNF34Q969K3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF34Q969K3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.6■□□□□ 0.73
RNF34Q969K3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 AC008622.2-201ENST00000617006 1229 ntBASIC19.6■□□□□ 0.73
RNF34Q969K3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
RNF34Q969K3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 AC010653.2-201ENST00000623505 997 ntBASIC19.6■□□□□ 0.73
RNF34Q969K3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF34Q969K3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF34Q969K3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RNF34Q969K3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF34Q969K3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RNF34Q969K3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF34Q969K3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF34Q969K3 AL512353.2-201ENST00000448759 1962 ntBASIC19.59■□□□□ 0.73
RNF34Q969K3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF34Q969K3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF34Q969K3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF34Q969K3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF34Q969K3 AC005363.2-201ENST00000618631 242 ntBASIC19.59■□□□□ 0.73
RNF34Q969K3 AC097493.4-201ENST00000641197 219 ntBASIC19.59■□□□□ 0.73
RNF34Q969K3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF34Q969K3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF34Q969K3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RNF34Q969K3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF34Q969K3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF34Q969K3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF34Q969K3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF34Q969K3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF34Q969K3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.58■□□□□ 0.73
RNF34Q969K3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF34Q969K3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF34Q969K3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RNF34Q969K3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF34Q969K3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
RNF34Q969K3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
RNF34Q969K3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF34Q969K3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF34Q969K3 LIN28AP1-201ENST00000429574 405 ntBASIC19.58■□□□□ 0.72
RNF34Q969K3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF34Q969K3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF34Q969K3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RNF34Q969K3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF34Q969K3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms