Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.09■■□□□ 1.29
RPGRQ92834 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RPGRQ92834 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RPGRQ92834 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.08■■□□□ 1.29
RPGRQ92834 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.08■■□□□ 1.29
RPGRQ92834 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RPGRQ92834 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.08■■□□□ 1.29
RPGRQ92834 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.08■■□□□ 1.29
RPGRQ92834 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RPGRQ92834 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.08■■□□□ 1.29
RPGRQ92834 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.08■■□□□ 1.29
RPGRQ92834 AP002469.2-201ENST00000531724 424 ntBASIC23.08■■□□□ 1.29
RPGRQ92834 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.08■■□□□ 1.29
RPGRQ92834 MIR3180-4-201ENST00000582223 153 ntBASIC23.08■■□□□ 1.29
RPGRQ92834 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
RPGRQ92834 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RPGRQ92834 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPGRQ92834 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.08■■□□□ 1.29
RPGRQ92834 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.08■■□□□ 1.29
RPGRQ92834 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RPGRQ92834 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 TREX1-205ENST00000625293 1783 ntBASIC23.07■■□□□ 1.28
RPGRQ92834 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.07■■□□□ 1.28
RPGRQ92834 AC079776.4-201ENST00000511039 504 ntBASIC23.07■■□□□ 1.28
RPGRQ92834 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23.07■■□□□ 1.28
RPGRQ92834 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPGRQ92834 FEM1AP3-201ENST00000403722 1741 ntBASIC23.07■■□□□ 1.28
RPGRQ92834 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.07■■□□□ 1.28
RPGRQ92834 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.07■■□□□ 1.28
RPGRQ92834 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 IGHGP-201ENST00000390555 1178 ntBASIC23.06■■□□□ 1.28
RPGRQ92834 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.06■■□□□ 1.28
RPGRQ92834 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
RPGRQ92834 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.06■■□□□ 1.28
RPGRQ92834 AL353801.3-201ENST00000609898 542 ntBASIC23.06■■□□□ 1.28
RPGRQ92834 AL592071.1-201ENST00000611956 408 ntBASIC23.06■■□□□ 1.28
RPGRQ92834 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.06■■□□□ 1.28
RPGRQ92834 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RPGRQ92834 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RPGRQ92834 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.06■■□□□ 1.28
RPGRQ92834 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.06■■□□□ 1.28
RPGRQ92834 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPGRQ92834 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.06■■□□□ 1.28
RPGRQ92834 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RPGRQ92834 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPGRQ92834 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPGRQ92834 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.05■■□□□ 1.28
RPGRQ92834 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPGRQ92834 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPGRQ92834 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
RPGRQ92834 KRT16P4-201ENST00000453883 522 ntBASIC23.05■■□□□ 1.28
RPGRQ92834 GUSBP12-201ENST00000513727 720 ntBASIC23.05■■□□□ 1.28
RPGRQ92834 AL662844.1-201ENST00000546340 181 ntBASIC23.05■■□□□ 1.28
RPGRQ92834 SLC25A6P4-201ENST00000586535 553 ntBASIC23.05■■□□□ 1.28
RPGRQ92834 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.05■■□□□ 1.28
RPGRQ92834 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.05■■□□□ 1.28
RPGRQ92834 AL121912.1-201ENST00000603683 238 ntBASIC23.05■■□□□ 1.28
RPGRQ92834 AC124864.1-201ENST00000623408 392 ntBASIC23.05■■□□□ 1.28
RPGRQ92834 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPGRQ92834 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.05■■□□□ 1.28
RPGRQ92834 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPGRQ92834 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPGRQ92834 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.04■■□□□ 1.28
RPGRQ92834 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RPGRQ92834 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPGRQ92834 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.04■■□□□ 1.28
RPGRQ92834 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPGRQ92834 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPGRQ92834 AC106795.1-205ENST00000512851 1056 ntBASIC23.04■■□□□ 1.28
RPGRQ92834 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.04■■□□□ 1.28
RPGRQ92834 AC024563.2-201ENST00000603282 481 ntBASIC23.04■■□□□ 1.28
RPGRQ92834 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms