Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.64■□□□□ 0.9
ATRIPQ8WXE1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
ATRIPQ8WXE1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AC067852.2-201ENST00000590513 2313 ntBASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 MMP23A-201ENST00000234610 1017 ntBASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.63■□□□□ 0.89
ATRIPQ8WXE1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 AL353708.3-201ENST00000610272 989 ntBASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 AC026471.5-201ENST00000615068 467 ntBASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 AC092865.7-201ENST00000641832 219 ntBASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.62■□□□□ 0.89
ATRIPQ8WXE1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.61■□□□□ 0.89
ATRIPQ8WXE1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms