Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.22■□□□□ 0.19
CCDC107Q8WV48 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AC083880.1-201ENST00000608266 535 ntBASIC16.22■□□□□ 0.19
CCDC107Q8WV48 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AP006587.1-201ENST00000534129 1502 ntBASIC16.22■□□□□ 0.19
CCDC107Q8WV48 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC107Q8WV48 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.21■□□□□ 0.19
CCDC107Q8WV48 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 SOX15-203ENST00000570788 1093 ntBASIC16.21■□□□□ 0.19
CCDC107Q8WV48 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 AL121906.2-201ENST00000621597 723 ntBASIC16.21■□□□□ 0.19
CCDC107Q8WV48 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 PRORSD1P-202ENST00000563365 2154 ntBASIC16.21■□□□□ 0.19
CCDC107Q8WV48 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC107Q8WV48 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC107Q8WV48 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC107Q8WV48 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC107Q8WV48 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CCDC107Q8WV48 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 ZNF815P-204ENST00000434898 1737 ntBASIC16.2■□□□□ 0.18
CCDC107Q8WV48 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.2■□□□□ 0.18
CCDC107Q8WV48 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 AC090192.1-201ENST00000517740 490 ntBASIC16.2■□□□□ 0.18
CCDC107Q8WV48 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 AC120498.8-201ENST00000614275 531 ntBASIC16.2■□□□□ 0.18
CCDC107Q8WV48 AC133041.1-202ENST00000642053 222 ntBASIC16.2■□□□□ 0.18
CCDC107Q8WV48 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CCDC107Q8WV48 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC107Q8WV48 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms