Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 AC106818.1-201ENST00000623223 3242 ntBASIC11.76□□□□□ -0.53
SVIPQ8NHG7 AC027601.5-201ENST00000624065 2482 ntBASIC11.76□□□□□ -0.53
SVIPQ8NHG7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 AC009113.1-201ENST00000570267 2443 ntBASIC11.76□□□□□ -0.53
SVIPQ8NHG7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SVIPQ8NHG7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 CICP11-201ENST00000434745 2827 ntBASIC11.75□□□□□ -0.53
SVIPQ8NHG7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SVIPQ8NHG7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 AC100797.4-201ENST00000631653 1827 ntBASIC11.74□□□□□ -0.53
SVIPQ8NHG7 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 LMOD3-203ENST00000489031 2221 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SVIPQ8NHG7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms