Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 SIRPAP1-201ENST00000448467 1770 ntBASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SPTSSBQ8NFR3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SPTSSBQ8NFR3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 AC019171.1-201ENST00000601251 1056 ntBASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SPTSSBQ8NFR3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms