Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 AL671277.2-201ENST00000458060 996 ntBASIC19.69■□□□□ 0.74
TTC16Q8NEE8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC16Q8NEE8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 KRT18P38-201ENST00000449496 1282 ntBASIC19.68■□□□□ 0.74
TTC16Q8NEE8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 GCSHP2-201ENST00000560971 527 ntBASIC19.68■□□□□ 0.74
TTC16Q8NEE8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 AC091076.1-201ENST00000610741 619 ntBASIC19.68■□□□□ 0.74
TTC16Q8NEE8 AC008622.2-201ENST00000617006 1229 ntBASIC19.68■□□□□ 0.74
TTC16Q8NEE8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TTC16Q8NEE8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 TSPY21P-201ENST00000433481 731 ntBASIC19.67■□□□□ 0.74
TTC16Q8NEE8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 HOMER2P1-201ENST00000455653 964 ntBASIC19.67■□□□□ 0.74
TTC16Q8NEE8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TTC16Q8NEE8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 AC036111.1-201ENST00000533973 1582 ntBASIC19.66■□□□□ 0.74
TTC16Q8NEE8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 GPAT2P1-201ENST00000444924 1672 ntBASIC19.66■□□□□ 0.74
TTC16Q8NEE8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 MYC-208ENST00000641036 567 ntBASIC19.66■□□□□ 0.74
TTC16Q8NEE8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TTC16Q8NEE8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms