Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SIMC1Q8NDZ2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 KRT8P9-201ENST00000558927 1449 ntBASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 DGCR10-201ENST00000609839 495 ntBASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SIMC1Q8NDZ2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.65■□□□□ 0.42
SIMC1Q8NDZ2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.64■□□□□ 0.42
SIMC1Q8NDZ2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.64■□□□□ 0.42
SIMC1Q8NDZ2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIMC1Q8NDZ2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
SIMC1Q8NDZ2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SIMC1Q8NDZ2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 UNC93B2-201ENST00000285383 730 ntBASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 MIR1238-201ENST00000408483 83 ntBASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 AC008622.2-201ENST00000617006 1229 ntBASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 KRT17P2-201ENST00000300992 1314 ntBASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIMC1Q8NDZ2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms