Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC016405.3-201ENST00000607710 860 ntBASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 AL139384.1-201ENST00000612143 3047 ntBASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.63■□□□□ 0.57
CCDC197Q8NCU1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 AC100791.3-201ENST00000617619 330 ntBASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC197Q8NCU1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 AC093677.2-201ENST00000600169 1863 ntBASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 AL162412.1-201ENST00000567129 965 ntBASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC197Q8NCU1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 KRT18P68-201ENST00000392293 1000 ntBASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC197Q8NCU1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms