Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCDH20Q8N6Y1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDH20Q8N6Y1 AC093503.3-201ENST00000624917 2352 ntBASIC19.14■□□□□ 0.66
PCDH20Q8N6Y1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCDH20Q8N6Y1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 KRT8P45-201ENST00000414328 1447 ntBASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH20Q8N6Y1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 MIR1224-201ENST00000408193 85 ntBASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH20Q8N6Y1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 AL023284.2-201ENST00000405850 579 ntBASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 AC006011.2-201ENST00000621313 1158 ntBASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH20Q8N6Y1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH20Q8N6Y1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms