Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 KRT8P7-201ENST00000533003 1432 ntBASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 AC093525.10-201ENST00000625130 1569 ntBASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 AL031432.5-201ENST00000641059 760 ntBASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAM1L1Q8N609 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 AC117947.1-201ENST00000427448 529 ntBASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 AC006011.2-201ENST00000621313 1158 ntBASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAM1L1Q8N609 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAM1L1Q8N609 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAM1L1Q8N609 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAM1L1Q8N609 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
TRAM1L1Q8N609 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAM1L1Q8N609 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRAM1L1Q8N609 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 HOXB1-202ENST00000577092 1414 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 AC140113.3-201ENST00000605663 199 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 AC139887.4-201ENST00000607877 719 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 AC112497.1-201ENST00000624824 639 ntBASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAM1L1Q8N609 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAM1L1Q8N609 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms