Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01561Q8N1V8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 AC018470.1-201ENST00000624790 3129 ntBASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 POM121L13P-201ENST00000422362 380 ntBASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 AL138781.1-201ENST00000566567 1274 ntBASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 AC126763.1-201ENST00000552015 2118 ntBASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01561Q8N1V8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
LINC01561Q8N1V8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
LINC01561Q8N1V8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.58□□□□□ -0.39
LINC01561Q8N1V8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.58□□□□□ -0.39
LINC01561Q8N1V8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 NCF1B-203ENST00000435988 1254 ntBASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 GUSBP6-202ENST00000438529 1198 ntBASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 UNC93B4-201ENST00000505679 747 ntBASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 AC012313.1-201ENST00000593393 3059 ntBASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms