Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL031008.1-201ENST00000619963 541 ntBASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RP1L1Q8IWN7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 TSSC2-201ENST00000450217 709 ntBASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 AP002414.4-201ENST00000589764 1148 ntBASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 AL157888.1-201ENST00000631930 593 ntBASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 ZNF815P-204ENST00000434898 1737 ntBASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 AL121912.1-201ENST00000603683 238 ntBASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RP1L1Q8IWN7 AC099343.3-201ENST00000605834 2503 ntBASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 AL031284.1-201ENST00000419297 478 ntBASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RP1L1Q8IWN7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RP1L1Q8IWN7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms