Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM4Q86VH4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 RNF165-205ENST00000588679 2904 ntBASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 MIR564-202ENST00000385049 94 ntBASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 TSPY5P-201ENST00000426936 936 ntBASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 AL590326.2-201ENST00000625139 305 ntBASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM4Q86VH4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 AL441883.1-201ENST00000566170 1045 ntBASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 LINC01238-205ENST00000567549 1107 ntBASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM4Q86VH4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 AC092647.4-201ENST00000457211 535 ntBASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 AC063952.2-201ENST00000498792 1227 ntBASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 AC022616.7-201ENST00000525383 220 ntBASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRTM4Q86VH4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM4Q86VH4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms