Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ZNF546Q86UE3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 FEM1AP3-201ENST00000403722 1741 ntBASIC15.6■□□□□ 0.09
ZNF546Q86UE3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF546Q86UE3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 AC108860.2-201ENST00000562760 2183 ntBASIC15.59■□□□□ 0.09
ZNF546Q86UE3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 AC142381.2-201ENST00000566120 298 ntBASIC15.59■□□□□ 0.09
ZNF546Q86UE3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF546Q86UE3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF546Q86UE3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 TERF1P2-201ENST00000583350 1212 ntBASIC15.58■□□□□ 0.08
ZNF546Q86UE3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ZNF546Q86UE3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms