Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD3Q7Z407 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 GPX1P2-201ENST00000429271 606 ntBASIC13.03□□□□□ -0.32
CSMD3Q7Z407 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 AC090616.6-201ENST00000582640 721 ntBASIC13.03□□□□□ -0.32
CSMD3Q7Z407 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CSMD3Q7Z407 KRT8P3-201ENST00000519669 1449 ntBASIC13.02□□□□□ -0.32
CSMD3Q7Z407 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 AL049840.3-201ENST00000602669 611 ntBASIC13.02□□□□□ -0.32
CSMD3Q7Z407 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD3Q7Z407 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 AC034105.1-201ENST00000563488 319 ntBASIC13.02□□□□□ -0.33
CSMD3Q7Z407 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 AC012676.1-201ENST00000574705 1949 ntBASIC13.02□□□□□ -0.33
CSMD3Q7Z407 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.02□□□□□ -0.33
CSMD3Q7Z407 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.01□□□□□ -0.33
CSMD3Q7Z407 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 AC098831.1-202ENST00000438821 336 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms