Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 AL353708.3-201ENST00000610272 989 ntBASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST3H2AQ7L7L0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 Z85996.1-201ENST00000494644 937 ntBASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 CR392000.1-201ENST00000624770 1228 ntBASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 KRT16P1-201ENST00000399124 1418 ntBASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HIST3H2AQ7L7L0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 RPS2P4-201ENST00000476944 856 ntBASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 AC083906.6-201ENST00000641366 219 ntBASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 AL031985.4-201ENST00000642138 673 ntBASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 AC093525.10-201ENST00000625130 1569 ntBASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HIST3H2AQ7L7L0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 AC004951.3-201ENST00000418645 1148 ntBASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 AC004980.1-204ENST00000429707 299 ntBASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 PRSS44-201ENST00000515154 1146 ntBASIC17.09■□□□□ 0.33
HIST3H2AQ7L7L0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms