Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 AC007663.1-201ENST00000438948 1240 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 BX088651.1-201ENST00000540551 451 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 MIR3180-5-201ENST00000583743 153 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 AC010653.2-201ENST00000623505 997 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 AL499627.1-201ENST00000569373 2188 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 AC005082.1-201ENST00000413042 2259 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 AC090164.3-201ENST00000610780 2143 ntBASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 WWOX-216ENST00000569818 525 ntBASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 AC010947.1-201ENST00000623454 693 ntBASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 CYP2D8P-201ENST00000433633 1490 ntBASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.13■□□□□ 0.17
COLCA1Q6ZS62 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 KRT8P9-201ENST00000558927 1449 ntBASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 AC009113.1-201ENST00000570267 2443 ntBASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 AC034236.2-201ENST00000606662 1610 ntBASIC16.12■□□□□ 0.17
COLCA1Q6ZS62 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 AC126763.1-201ENST00000552015 2118 ntBASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms