Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 UBE2SP1-201ENST00000450587 669 ntBASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 KRT18P16-201ENST00000510337 1294 ntBASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF111Q6ZNA4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF111Q6ZNA4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF111Q6ZNA4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF111Q6ZNA4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF111Q6ZNA4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms