Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCNIP4Q6PIL6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.55□□□□□ -0.08
KCNIP4Q6PIL6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 AD000864.1-201ENST00000624076 2295 ntBASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.54□□□□□ -0.08
KCNIP4Q6PIL6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 AL136967.2-201ENST00000623968 743 ntBASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KCNIP4Q6PIL6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
KCNIP4Q6PIL6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.52□□□□□ -0.09
KCNIP4Q6PIL6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KCNIP4Q6PIL6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KCNIP4Q6PIL6 AC007322.3-201ENST00000426526 701 ntBASIC14.52□□□□□ -0.09
KCNIP4Q6PIL6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
KCNIP4Q6PIL6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms