Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC009065.1-201ENST00000564055 1225 ntBASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 AP005901.3-202ENST00000581653 237 ntBASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 KRT89P-201ENST00000620027 1478 ntBASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 AL353692.3-201ENST00000407031 1396 ntBASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNKSR3Q6P9H4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNKSR3Q6P9H4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CNKSR3Q6P9H4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CNKSR3Q6P9H4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CNKSR3Q6P9H4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 MINOS1P3-201ENST00000457048 203 ntBASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 AP001005.1-201ENST00000571755 1248 ntBASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 AC117500.6-201ENST00000624871 588 ntBASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNKSR3Q6P9H4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 PMS2P1-201ENST00000431037 1228 ntBASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 AC091607.1-201ENST00000490318 1060 ntBASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 AC011840.4-201ENST00000578471 627 ntBASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 TP73-AS1-207ENST00000624167 988 ntBASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNKSR3Q6P9H4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CNKSR3Q6P9H4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNKSR3Q6P9H4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CNKSR3Q6P9H4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.12■□□□□ 0.81
CNKSR3Q6P9H4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.12■□□□□ 0.81
CNKSR3Q6P9H4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNKSR3Q6P9H4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms