Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL353719.1-201ENST00000566847 864 ntBASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 LINC01023-201ENST00000606054 436 ntBASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA1Q5Y7H0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC145285.6-201ENST00000604632 637 ntBASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC010653.2-201ENST00000623505 997 ntBASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA1Q5Y7H0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL049812.1-201ENST00000432563 2267 ntBASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC211429.1-201ENST00000415277 523 ntBASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC007663.1-201ENST00000438948 1240 ntBASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL023803.3-201ENST00000615559 522 ntBASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA1Q5Y7H0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC092338.2-201ENST00000568827 1415 ntBASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms