Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.27
CCDC58Q4VC31 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CCDC58Q4VC31 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 PCDHA12-202ENST00000613593 2588 ntBASIC16.76■□□□□ 0.27
CCDC58Q4VC31 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 TSPY21P-201ENST00000433481 731 ntBASIC16.76■□□□□ 0.27
CCDC58Q4VC31 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC58Q4VC31 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 AC105036.2-201ENST00000569468 176 ntBASIC16.75■□□□□ 0.27
CCDC58Q4VC31 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC58Q4VC31 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CCDC58Q4VC31 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms