Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH17Q12864 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH17Q12864 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH17Q12864 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH17Q12864 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH17Q12864 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH17Q12864 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CDH17Q12864 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH17Q12864 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH17Q12864 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH17Q12864 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH17Q12864 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH17Q12864 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH17Q12864 MFAP1P1-201ENST00000442257 1255 ntBASIC18.95■□□□□ 0.62
CDH17Q12864 AL355355.2-201ENST00000442321 338 ntBASIC18.95■□□□□ 0.62
CDH17Q12864 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH17Q12864 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH17Q12864 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDH17Q12864 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDH17Q12864 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH17Q12864 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDH17Q12864 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH17Q12864 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDH17Q12864 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH17Q12864 Z99916.2-201ENST00000604037 246 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 AC026471.5-201ENST00000615068 467 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 REXO1L10P-201ENST00000615707 1290 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 REXO1L12P-201ENST00000622156 912 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 MYC-208ENST00000641036 567 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 AL357033.4-201ENST00000617703 1807 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 AC073592.3-201ENST00000625118 1834 ntBASIC18.94■□□□□ 0.62
CDH17Q12864 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH17Q12864 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDH17Q12864 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH17Q12864 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH17Q12864 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDH17Q12864 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH17Q12864 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDH17Q12864 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
CDH17Q12864 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH17Q12864 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH17Q12864 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 AC097488.1-201ENST00000507834 756 ntBASIC18.93■□□□□ 0.62
CDH17Q12864 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH17Q12864 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH17Q12864 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH17Q12864 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.93■□□□□ 0.62
CDH17Q12864 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
CDH17Q12864 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH17Q12864 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH17Q12864 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH17Q12864 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms