Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH1Q08174 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH1Q08174 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH1Q08174 AP003071.4-201ENST00000562276 1284 ntBASIC18.09■□□□□ 0.49
PCDH1Q08174 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH1Q08174 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH1Q08174 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH1Q08174 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.09■□□□□ 0.49
PCDH1Q08174 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH1Q08174 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
PCDH1Q08174 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH1Q08174 KRT8P45-201ENST00000414328 1447 ntBASIC18.08■□□□□ 0.49
PCDH1Q08174 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH1Q08174 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH1Q08174 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH1Q08174 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH1Q08174 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH1Q08174 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH1Q08174 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDH1Q08174 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH1Q08174 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH1Q08174 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH1Q08174 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 SLC25A1P4-201ENST00000567977 778 ntBASIC18.08■□□□□ 0.48
PCDH1Q08174 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH1Q08174 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDH1Q08174 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH1Q08174 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH1Q08174 RCC2P3-201ENST00000418112 1537 ntBASIC18.08■□□□□ 0.48
PCDH1Q08174 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 AL357033.4-201ENST00000617703 1807 ntBASIC18.07■□□□□ 0.48
PCDH1Q08174 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDH1Q08174 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH1Q08174 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDH1Q08174 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH1Q08174 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDH1Q08174 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
PCDH1Q08174 MYC-208ENST00000641036 567 ntBASIC18.07■□□□□ 0.48
PCDH1Q08174 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDH1Q08174 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH1Q08174 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH1Q08174 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH1Q08174 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH1Q08174 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH1Q08174 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 AC112777.1-201ENST00000540175 1423 ntBASIC18.06■□□□□ 0.48
PCDH1Q08174 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH1Q08174 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDH1Q08174 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH1Q08174 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH1Q08174 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH1Q08174 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH1Q08174 MIR4785-201ENST00000585005 73 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms