Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.3■■□□□ 1
CCNA1P78396 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 IGHGP-201ENST00000390555 1178 ntBASIC21.3■■□□□ 1
CCNA1P78396 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
CCNA1P78396 AC079781.3-201ENST00000449110 356 ntBASIC21.3■■□□□ 1
CCNA1P78396 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.3■■□□□ 1
CCNA1P78396 VENTXP7-201ENST00000475503 772 ntBASIC21.3■■□□□ 1
CCNA1P78396 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.3■■□□□ 1
CCNA1P78396 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.3■■□□□ 1
CCNA1P78396 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.3■■□□□ 1
CCNA1P78396 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.3■■□□□ 1
CCNA1P78396 AC024563.2-201ENST00000603282 481 ntBASIC21.3■■□□□ 1
CCNA1P78396 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.3■■□□□ 1
CCNA1P78396 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.3■■□□□ 1
CCNA1P78396 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.3■■□□□ 1
CCNA1P78396 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CCNA1P78396 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 LINC00167-201ENST00000530583 1419 ntBASIC21.29■■□□□ 1
CCNA1P78396 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.29■■□□□ 1
CCNA1P78396 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CCNA1P78396 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 AL662844.1-201ENST00000546340 181 ntBASIC21.29■■□□□ 1
CCNA1P78396 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 AC099336.1-202ENST00000602961 463 ntBASIC21.29■■□□□ 1
CCNA1P78396 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.29■■□□□ 1
CCNA1P78396 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.29■■□□□ 1
CCNA1P78396 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.29■■□□□ 1
CCNA1P78396 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNA1P78396 TREX1-205ENST00000625293 1783 ntBASIC21.28■■□□□ 1
CCNA1P78396 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CCNA1P78396 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.28■■□□□ 1
CCNA1P78396 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.28■■□□□ 1
CCNA1P78396 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCNA1P78396 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNA1P78396 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.27■■□□□ 1
CCNA1P78396 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCNA1P78396 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.27■■□□□ 1
CCNA1P78396 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CCNA1P78396 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.27■■□□□ 1
CCNA1P78396 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.27■■□□□ 1
CCNA1P78396 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNA1P78396 AC106795.1-205ENST00000512851 1056 ntBASIC21.27■■□□□ 1
CCNA1P78396 AP002469.2-201ENST00000531724 424 ntBASIC21.27■■□□□ 1
CCNA1P78396 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.27■■□□□ 1
CCNA1P78396 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms