Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC42P60953 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.16■□□□□ 0.34
CDC42P60953 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC42P60953 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDC42P60953 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDC42P60953 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDC42P60953 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDC42P60953 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC42P60953 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDC42P60953 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDC42P60953 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDC42P60953 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC42P60953 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42P60953 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC42P60953 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.15■□□□□ 0.34
CDC42P60953 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.15■□□□□ 0.34
CDC42P60953 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDC42P60953 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.15■□□□□ 0.34
CDC42P60953 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 AC133552.2-202ENST00000575694 574 ntBASIC17.15■□□□□ 0.34
CDC42P60953 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.15■□□□□ 0.34
CDC42P60953 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.15■□□□□ 0.34
CDC42P60953 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.15■□□□□ 0.34
CDC42P60953 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42P60953 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CDC42P60953 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.15■□□□□ 0.34
CDC42P60953 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CDC42P60953 ESPNP-201ENST00000270691 2015 ntBASIC17.14■□□□□ 0.34
CDC42P60953 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CDC42P60953 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.14■□□□□ 0.33
CDC42P60953 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 MIR5787-201ENST00000611784 55 ntBASIC17.14■□□□□ 0.33
CDC42P60953 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDC42P60953 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CDC42P60953 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 GNAS-203ENST00000306120 1878 ntBASIC17.14■□□□□ 0.33
CDC42P60953 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDC42P60953 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42P60953 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDC42P60953 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42P60953 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.13■□□□□ 0.33
CDC42P60953 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms