Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC4P56524 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC4P56524 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.58■□□□□ 0.72
HDAC4P56524 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC4P56524 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC4P56524 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC4P56524 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HDAC4P56524 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.58■□□□□ 0.72
HDAC4P56524 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC4P56524 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
HDAC4P56524 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.58■□□□□ 0.72
HDAC4P56524 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
HDAC4P56524 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC4P56524 ANO7L1-203ENST00000602586 1720 ntBASIC19.57■□□□□ 0.72
HDAC4P56524 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HDAC4P56524 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.57■□□□□ 0.72
HDAC4P56524 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC4P56524 AL023284.2-201ENST00000405850 579 ntBASIC19.57■□□□□ 0.72
HDAC4P56524 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC4P56524 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.57■□□□□ 0.72
HDAC4P56524 MIR4674-201ENST00000582457 87 ntBASIC19.57■□□□□ 0.72
HDAC4P56524 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC4P56524 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC4P56524 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC4P56524 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.57■□□□□ 0.72
HDAC4P56524 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.56■□□□□ 0.72
HDAC4P56524 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HDAC4P56524 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
HDAC4P56524 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.56■□□□□ 0.72
HDAC4P56524 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
HDAC4P56524 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.56■□□□□ 0.72
HDAC4P56524 AC010947.1-201ENST00000623454 693 ntBASIC19.56■□□□□ 0.72
HDAC4P56524 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.56■□□□□ 0.72
HDAC4P56524 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.56■□□□□ 0.72
HDAC4P56524 AC092338.2-201ENST00000568827 1415 ntBASIC19.56■□□□□ 0.72
HDAC4P56524 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.56■□□□□ 0.72
HDAC4P56524 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HDAC4P56524 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.56■□□□□ 0.72
HDAC4P56524 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HDAC4P56524 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC4P56524 AL109659.2-201ENST00000606809 1674 ntBASIC19.56■□□□□ 0.72
HDAC4P56524 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 MMP23A-201ENST00000234610 1017 ntBASIC19.55■□□□□ 0.72
HDAC4P56524 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.55■□□□□ 0.72
HDAC4P56524 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.55■□□□□ 0.72
HDAC4P56524 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.55■□□□□ 0.72
HDAC4P56524 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.55■□□□□ 0.72
HDAC4P56524 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.55■□□□□ 0.72
HDAC4P56524 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC4P56524 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 BX088651.1-201ENST00000540551 451 ntBASIC19.55■□□□□ 0.72
HDAC4P56524 AL353719.1-201ENST00000566847 864 ntBASIC19.55■□□□□ 0.72
HDAC4P56524 AC008556.1-201ENST00000610908 2040 ntBASIC19.55■□□□□ 0.72
HDAC4P56524 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.55■□□□□ 0.72
HDAC4P56524 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC4P56524 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HDAC4P56524 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HDAC4P56524 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC4P56524 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC4P56524 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC4P56524 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
HDAC4P56524 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.54■□□□□ 0.72
HDAC4P56524 AL357033.4-201ENST00000617703 1807 ntBASIC19.54■□□□□ 0.72
HDAC4P56524 TSPY14P-201ENST00000303979 915 ntBASIC19.54■□□□□ 0.72
HDAC4P56524 INGX-201ENST00000359239 846 ntBASIC19.54■□□□□ 0.72
HDAC4P56524 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC4P56524 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC4P56524 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.54■□□□□ 0.72
HDAC4P56524 C2orf69P3-201ENST00000565542 1120 ntBASIC19.54■□□□□ 0.72
HDAC4P56524 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC4P56524 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC4P56524 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms