Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.17■□□□□ 0.66
CDH4P55283 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH4P55283 AC112497.1-201ENST00000624824 639 ntBASIC19.17■□□□□ 0.66
CDH4P55283 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDH4P55283 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH4P55283 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH4P55283 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH4P55283 HOXB1-202ENST00000577092 1414 ntBASIC19.17■□□□□ 0.66
CDH4P55283 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH4P55283 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH4P55283 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDH4P55283 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH4P55283 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.16■□□□□ 0.66
CDH4P55283 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.16■□□□□ 0.66
CDH4P55283 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.16■□□□□ 0.66
CDH4P55283 AC063952.2-201ENST00000498792 1227 ntBASIC19.16■□□□□ 0.66
CDH4P55283 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.16■□□□□ 0.66
CDH4P55283 GCSHP2-201ENST00000560971 527 ntBASIC19.16■□□□□ 0.66
CDH4P55283 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.16■□□□□ 0.66
CDH4P55283 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CDH4P55283 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH4P55283 AC010331.1-201ENST00000611423 582 ntBASIC19.16■□□□□ 0.66
CDH4P55283 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH4P55283 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH4P55283 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 Z98044.1-201ENST00000632503 1764 ntBASIC19.16■□□□□ 0.66
CDH4P55283 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDH4P55283 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH4P55283 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH4P55283 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH4P55283 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDH4P55283 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 KRT18P23-201ENST00000435622 1283 ntBASIC19.15■□□□□ 0.66
CDH4P55283 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH4P55283 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 LINC01238-205ENST00000567549 1107 ntBASIC19.15■□□□□ 0.66
CDH4P55283 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 AL590326.2-201ENST00000625139 305 ntBASIC19.15■□□□□ 0.66
CDH4P55283 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH4P55283 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH4P55283 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH4P55283 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH4P55283 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDH4P55283 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.14■□□□□ 0.65
CDH4P55283 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CDH4P55283 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.14■□□□□ 0.65
CDH4P55283 HOMER2P1-201ENST00000455653 964 ntBASIC19.14■□□□□ 0.65
CDH4P55283 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDH4P55283 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH4P55283 AC022616.7-201ENST00000525383 220 ntBASIC19.14■□□□□ 0.65
CDH4P55283 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.14■□□□□ 0.65
CDH4P55283 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms