Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 KRT8P3-201ENST00000519669 1449 ntBASIC17.47■□□□□ 0.39
PSMD4P55036 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.47■□□□□ 0.39
PSMD4P55036 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.47■□□□□ 0.39
PSMD4P55036 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.47■□□□□ 0.39
PSMD4P55036 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.47■□□□□ 0.39
PSMD4P55036 RBM17P1-201ENST00000453646 1190 ntBASIC17.47■□□□□ 0.39
PSMD4P55036 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.47■□□□□ 0.39
PSMD4P55036 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.47■□□□□ 0.39
PSMD4P55036 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PSMD4P55036 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PSMD4P55036 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PSMD4P55036 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.47■□□□□ 0.39
PSMD4P55036 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PSMD4P55036 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.47■□□□□ 0.39
PSMD4P55036 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PSMD4P55036 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PSMD4P55036 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
PSMD4P55036 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.46■□□□□ 0.39
PSMD4P55036 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.46■□□□□ 0.39
PSMD4P55036 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.46■□□□□ 0.39
PSMD4P55036 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.46■□□□□ 0.39
PSMD4P55036 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PSMD4P55036 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.46■□□□□ 0.39
PSMD4P55036 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PSMD4P55036 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PSMD4P55036 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PSMD4P55036 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.45■□□□□ 0.38
PSMD4P55036 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PSMD4P55036 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.45■□□□□ 0.38
PSMD4P55036 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.45■□□□□ 0.38
PSMD4P55036 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.45■□□□□ 0.38
PSMD4P55036 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.45■□□□□ 0.38
PSMD4P55036 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 Z98044.1-201ENST00000632503 1764 ntBASIC17.45■□□□□ 0.38
PSMD4P55036 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.45■□□□□ 0.38
PSMD4P55036 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PSMD4P55036 CROCCP3-202ENST00000420820 1947 ntBASIC17.45■□□□□ 0.38
PSMD4P55036 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PSMD4P55036 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms