Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.87■□□□□ 0.77
CACNA2D1P54289 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.87■□□□□ 0.77
CACNA2D1P54289 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CACNA2D1P54289 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.87■□□□□ 0.77
CACNA2D1P54289 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA2D1P54289 RCC2P3-201ENST00000418112 1537 ntBASIC19.86■□□□□ 0.77
CACNA2D1P54289 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 AC008556.1-201ENST00000610908 2040 ntBASIC19.86■□□□□ 0.77
CACNA2D1P54289 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA2D1P54289 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA2D1P54289 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 AC063952.2-201ENST00000498792 1227 ntBASIC19.85■□□□□ 0.77
CACNA2D1P54289 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 NTF6B-201ENST00000591913 560 ntBASIC19.85■□□□□ 0.77
CACNA2D1P54289 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA2D1P54289 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CACNA2D1P54289 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 MCCD1P1-208ENST00000445732 328 ntBASIC19.84■□□□□ 0.77
CACNA2D1P54289 AC022616.7-201ENST00000525383 220 ntBASIC19.84■□□□□ 0.77
CACNA2D1P54289 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 AL512604.3-201ENST00000569583 964 ntBASIC19.84■□□□□ 0.77
CACNA2D1P54289 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 KRT8P32-201ENST00000512863 1461 ntBASIC19.84■□□□□ 0.77
CACNA2D1P54289 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA2D1P54289 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA2D1P54289 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms