Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
ATXN3P54252 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
ATXN3P54252 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.14■□□□□ 0.65
ATXN3P54252 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.14■□□□□ 0.65
ATXN3P54252 PHGDH-210ENST00000641115 1638 ntBASIC19.14■□□□□ 0.65
ATXN3P54252 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATXN3P54252 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
ATXN3P54252 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 AC026396.1-201ENST00000419388 421 ntBASIC19.13■□□□□ 0.65
ATXN3P54252 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.13■□□□□ 0.65
ATXN3P54252 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.13■□□□□ 0.65
ATXN3P54252 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.13■□□□□ 0.65
ATXN3P54252 AL691432.3-201ENST00000621860 400 ntBASIC19.13■□□□□ 0.65
ATXN3P54252 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 AC092338.2-201ENST00000568827 1415 ntBASIC19.13■□□□□ 0.65
ATXN3P54252 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.13■□□□□ 0.65
ATXN3P54252 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATXN3P54252 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATXN3P54252 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
ATXN3P54252 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATXN3P54252 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ATXN3P54252 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATXN3P54252 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
ATXN3P54252 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.12■□□□□ 0.65
ATXN3P54252 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.12■□□□□ 0.65
ATXN3P54252 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.12■□□□□ 0.65
ATXN3P54252 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ATXN3P54252 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.12■□□□□ 0.65
ATXN3P54252 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.12■□□□□ 0.65
ATXN3P54252 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
ATXN3P54252 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATXN3P54252 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATXN3P54252 TREX1-205ENST00000625293 1783 ntBASIC19.11■□□□□ 0.65
ATXN3P54252 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.11■□□□□ 0.65
ATXN3P54252 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.11■□□□□ 0.65
ATXN3P54252 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.11■□□□□ 0.65
ATXN3P54252 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.11■□□□□ 0.65
ATXN3P54252 AL353719.1-201ENST00000566847 864 ntBASIC19.11■□□□□ 0.65
ATXN3P54252 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ATXN3P54252 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.11■□□□□ 0.65
ATXN3P54252 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.11■□□□□ 0.65
ATXN3P54252 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
ATXN3P54252 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.11■□□□□ 0.65
ATXN3P54252 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATXN3P54252 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms