Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 LTB4R2-202ENST00000528054 3092 ntBASIC19.26■□□□□ 0.67
ITGA8P53708 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.26■□□□□ 0.67
ITGA8P53708 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.26■□□□□ 0.67
ITGA8P53708 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.26■□□□□ 0.67
ITGA8P53708 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.26■□□□□ 0.67
ITGA8P53708 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.26■□□□□ 0.67
ITGA8P53708 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ITGA8P53708 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.25■□□□□ 0.67
ITGA8P53708 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ITGA8P53708 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
ITGA8P53708 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.25■□□□□ 0.67
ITGA8P53708 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.25■□□□□ 0.67
ITGA8P53708 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
ITGA8P53708 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.25■□□□□ 0.67
ITGA8P53708 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ITGA8P53708 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.25■□□□□ 0.67
ITGA8P53708 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.25■□□□□ 0.67
ITGA8P53708 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ITGA8P53708 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.25■□□□□ 0.67
ITGA8P53708 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA8P53708 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ITGA8P53708 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ITGA8P53708 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 POU5F1P3-201ENST00000428824 1078 ntBASIC19.24■□□□□ 0.67
ITGA8P53708 Z85996.1-201ENST00000494644 937 ntBASIC19.24■□□□□ 0.67
ITGA8P53708 UNC93B5-201ENST00000530315 699 ntBASIC19.24■□□□□ 0.67
ITGA8P53708 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.24■□□□□ 0.67
ITGA8P53708 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 AC008764.6-201ENST00000595909 2069 ntBASIC19.24■□□□□ 0.67
ITGA8P53708 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.24■□□□□ 0.67
ITGA8P53708 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA8P53708 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ITGA8P53708 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA8P53708 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ITGA8P53708 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ITGA8P53708 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA8P53708 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA8P53708 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA8P53708 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ITGA8P53708 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA8P53708 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.23■□□□□ 0.67
ITGA8P53708 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.23■□□□□ 0.67
ITGA8P53708 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.23■□□□□ 0.67
ITGA8P53708 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.23■□□□□ 0.67
ITGA8P53708 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA8P53708 AC008403.3-201ENST00000598924 454 ntBASIC19.23■□□□□ 0.67
ITGA8P53708 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.23■□□□□ 0.67
ITGA8P53708 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ITGA8P53708 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA8P53708 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA8P53708 AC135776.1-201ENST00000319817 2481 ntBASIC19.23■□□□□ 0.67
ITGA8P53708 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA8P53708 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA8P53708 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA8P53708 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ITGA8P53708 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA8P53708 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ITGA8P53708 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms