Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
COPAP53621 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.33■□□□□ 0.68
COPAP53621 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.33■□□□□ 0.68
COPAP53621 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.33■□□□□ 0.68
COPAP53621 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.33■□□□□ 0.68
COPAP53621 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COPAP53621 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.33■□□□□ 0.68
COPAP53621 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.33■□□□□ 0.68
COPAP53621 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.32■□□□□ 0.68
COPAP53621 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
COPAP53621 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.32■□□□□ 0.68
COPAP53621 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.32■□□□□ 0.68
COPAP53621 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.32■□□□□ 0.68
COPAP53621 PRSS44-201ENST00000515154 1146 ntBASIC19.32■□□□□ 0.68
COPAP53621 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.32■□□□□ 0.68
COPAP53621 AL512604.3-201ENST00000569583 964 ntBASIC19.32■□□□□ 0.68
COPAP53621 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 AC011558.1-201ENST00000623459 338 ntBASIC19.32■□□□□ 0.68
COPAP53621 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COPAP53621 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
COPAP53621 AC138932.1-201ENST00000534164 6830 ntBASIC19.32■□□□□ 0.68
COPAP53621 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPAP53621 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COPAP53621 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.32■□□□□ 0.68
COPAP53621 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
COPAP53621 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COPAP53621 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COPAP53621 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.31■□□□□ 0.68
COPAP53621 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.31■□□□□ 0.68
COPAP53621 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.31■□□□□ 0.68
COPAP53621 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COPAP53621 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 AC104417.2-201ENST00000562989 1793 ntBASIC19.31■□□□□ 0.68
COPAP53621 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COPAP53621 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.3■□□□□ 0.68
COPAP53621 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.3■□□□□ 0.68
COPAP53621 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.3■□□□□ 0.68
COPAP53621 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.3■□□□□ 0.68
COPAP53621 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.3■□□□□ 0.68
COPAP53621 AL031133.1-201ENST00000406807 723 ntBASIC19.3■□□□□ 0.68
COPAP53621 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.3■□□□□ 0.68
COPAP53621 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.3■□□□□ 0.68
COPAP53621 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
COPAP53621 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.3■□□□□ 0.68
COPAP53621 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPAP53621 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COPAP53621 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COPAP53621 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COPAP53621 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPAP53621 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms