Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
GTF2A1P52655 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.41■□□□□ 0.54
GTF2A1P52655 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.41■□□□□ 0.54
GTF2A1P52655 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
GTF2A1P52655 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
GTF2A1P52655 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
GTF2A1P52655 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.41■□□□□ 0.54
GTF2A1P52655 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.41■□□□□ 0.54
GTF2A1P52655 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GTF2A1P52655 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GTF2A1P52655 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GTF2A1P52655 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.4■□□□□ 0.54
GTF2A1P52655 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
GTF2A1P52655 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
GTF2A1P52655 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GTF2A1P52655 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GTF2A1P52655 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GTF2A1P52655 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.39■□□□□ 0.54
GTF2A1P52655 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.39■□□□□ 0.54
GTF2A1P52655 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.39■□□□□ 0.54
GTF2A1P52655 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
GTF2A1P52655 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GTF2A1P52655 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
GTF2A1P52655 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
GTF2A1P52655 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GTF2A1P52655 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.39■□□□□ 0.54
GTF2A1P52655 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.39■□□□□ 0.53
GTF2A1P52655 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.39■□□□□ 0.53
GTF2A1P52655 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.39■□□□□ 0.53
GTF2A1P52655 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.39■□□□□ 0.53
GTF2A1P52655 SMUG1P1-201ENST00000590640 811 ntBASIC18.39■□□□□ 0.53
GTF2A1P52655 AL138724.1-201ENST00000606771 1088 ntBASIC18.39■□□□□ 0.53
GTF2A1P52655 AC136469.2-201ENST00000623944 1028 ntBASIC18.39■□□□□ 0.53
GTF2A1P52655 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GTF2A1P52655 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GTF2A1P52655 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GTF2A1P52655 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.38■□□□□ 0.53
GTF2A1P52655 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
GTF2A1P52655 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms