Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.7■□□□□ 0.9
GPC3P51654 AL161938.1-201ENST00000569833 2180 ntBASIC20.7■□□□□ 0.9
GPC3P51654 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
GPC3P51654 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GPC3P51654 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.7■□□□□ 0.9
GPC3P51654 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.69■□□□□ 0.9
GPC3P51654 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.69■□□□□ 0.9
GPC3P51654 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 PCED1CP-201ENST00000419887 785 ntBASIC20.69■□□□□ 0.9
GPC3P51654 UPK3BP1-201ENST00000428678 509 ntBASIC20.69■□□□□ 0.9
GPC3P51654 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC3P51654 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.69■□□□□ 0.9
GPC3P51654 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.69■□□□□ 0.9
GPC3P51654 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GPC3P51654 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.68■□□□□ 0.9
GPC3P51654 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.68■□□□□ 0.9
GPC3P51654 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.68■□□□□ 0.9
GPC3P51654 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC3P51654 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.68■□□□□ 0.9
GPC3P51654 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC3P51654 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 AC024243.1-201ENST00000609234 778 ntBASIC20.68■□□□□ 0.9
GPC3P51654 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GPC3P51654 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GPC3P51654 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
GPC3P51654 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.68■□□□□ 0.9
GPC3P51654 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC3P51654 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GPC3P51654 RCC2P3-201ENST00000418112 1537 ntBASIC20.68■□□□□ 0.9
GPC3P51654 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.68■□□□□ 0.9
GPC3P51654 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
GPC3P51654 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.67■□□□□ 0.9
GPC3P51654 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.67■□□□□ 0.9
GPC3P51654 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC3P51654 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.67■□□□□ 0.9
GPC3P51654 AC005332.1-201ENST00000577698 1310 ntBASIC20.67■□□□□ 0.9
GPC3P51654 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
GPC3P51654 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 AP000974.1-201ENST00000623909 2387 ntBASIC20.67■□□□□ 0.9
GPC3P51654 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 AL109659.2-201ENST00000606809 1674 ntBASIC20.67■□□□□ 0.9
GPC3P51654 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
GPC3P51654 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GPC3P51654 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC3P51654 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC3P51654 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC3P51654 FP475955.4-201ENST00000623131 1990 ntBASIC20.66■□□□□ 0.9
GPC3P51654 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GPC3P51654 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.66■□□□□ 0.9
GPC3P51654 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.66■□□□□ 0.9
GPC3P51654 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.66■□□□□ 0.9
GPC3P51654 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms