Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2AP49459 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.9□□□□□ -0.5
UBE2AP49459 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2AP49459 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
UBE2AP49459 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2AP49459 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2AP49459 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
UBE2AP49459 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
UBE2AP49459 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
UBE2AP49459 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2AP49459 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2AP49459 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBE2AP49459 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBE2AP49459 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2AP49459 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2AP49459 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2AP49459 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2AP49459 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11.9□□□□□ -0.51
UBE2AP49459 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
UBE2AP49459 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2AP49459 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2AP49459 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2AP49459 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2AP49459 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2AP49459 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
UBE2AP49459 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2AP49459 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC11.89□□□□□ -0.51
UBE2AP49459 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
UBE2AP49459 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 AC069544.1-201ENST00000609399 999 ntBASIC11.89□□□□□ -0.51
UBE2AP49459 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 TEX21P-204ENST00000641479 1693 ntBASIC11.89□□□□□ -0.51
UBE2AP49459 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2AP49459 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC11.89□□□□□ -0.51
UBE2AP49459 AC104417.2-201ENST00000562989 1793 ntBASIC11.89□□□□□ -0.51
UBE2AP49459 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
UBE2AP49459 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2AP49459 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2AP49459 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2AP49459 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
UBE2AP49459 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2AP49459 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2AP49459 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2AP49459 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2AP49459 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
UBE2AP49459 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2AP49459 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.88□□□□□ -0.51
UBE2AP49459 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2AP49459 RHOD-202ENST00000532559 538 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2AP49459 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 KRT18P6-201ENST00000555540 1265 ntBASIC11.88□□□□□ -0.51
UBE2AP49459 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2AP49459 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2AP49459 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms