Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MMP13P45452 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MMP13P45452 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MMP13P45452 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MMP13P45452 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.51■□□□□ 0.71
MMP13P45452 AC004951.3-201ENST00000418645 1148 ntBASIC19.51■□□□□ 0.71
MMP13P45452 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.51■□□□□ 0.71
MMP13P45452 NUDT16P1-203ENST00000513809 620 ntBASIC19.51■□□□□ 0.71
MMP13P45452 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.51■□□□□ 0.71
MMP13P45452 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MMP13P45452 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.51■□□□□ 0.71
MMP13P45452 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.51■□□□□ 0.71
MMP13P45452 MIR6786-201ENST00000616843 113 ntBASIC19.51■□□□□ 0.71
MMP13P45452 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MMP13P45452 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MMP13P45452 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.51■□□□□ 0.71
MMP13P45452 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MMP13P45452 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
MMP13P45452 TSPY21P-201ENST00000433481 731 ntBASIC19.5■□□□□ 0.71
MMP13P45452 AL355355.2-201ENST00000442321 338 ntBASIC19.5■□□□□ 0.71
MMP13P45452 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.5■□□□□ 0.71
MMP13P45452 B3GAT3P1-201ENST00000471720 806 ntBASIC19.5■□□□□ 0.71
MMP13P45452 AC011506.1-201ENST00000474329 610 ntBASIC19.5■□□□□ 0.71
MMP13P45452 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.5■□□□□ 0.71
MMP13P45452 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP13P45452 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.5■□□□□ 0.71
MMP13P45452 AC011298.2-201ENST00000617989 482 ntBASIC19.5■□□□□ 0.71
MMP13P45452 AC066615.1-201ENST00000640911 628 ntBASIC19.5■□□□□ 0.71
MMP13P45452 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP13P45452 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP13P45452 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MMP13P45452 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP13P45452 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP13P45452 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.5■□□□□ 0.71
MMP13P45452 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.5■□□□□ 0.71
MMP13P45452 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MMP13P45452 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 FSCN1P1-201ENST00000568912 1481 ntBASIC19.49■□□□□ 0.71
MMP13P45452 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.49■□□□□ 0.71
MMP13P45452 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MMP13P45452 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MMP13P45452 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
MMP13P45452 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.49■□□□□ 0.71
MMP13P45452 TSPY7P-201ENST00000431358 1114 ntBASIC19.49■□□□□ 0.71
MMP13P45452 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 AC091390.4-202ENST00000476426 537 ntBASIC19.49■□□□□ 0.71
MMP13P45452 AC093827.2-201ENST00000512654 315 ntBASIC19.49■□□□□ 0.71
MMP13P45452 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 AC026471.5-201ENST00000615068 467 ntBASIC19.49■□□□□ 0.71
MMP13P45452 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.49■□□□□ 0.71
MMP13P45452 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms