Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MTHFRP42898 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.6■□□□□ 0.73
MTHFRP42898 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.6■□□□□ 0.73
MTHFRP42898 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.6■□□□□ 0.73
MTHFRP42898 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.6■□□□□ 0.73
MTHFRP42898 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MTHFRP42898 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 RNF165-205ENST00000588679 2904 ntBASIC19.6■□□□□ 0.73
MTHFRP42898 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MTHFRP42898 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MTHFRP42898 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.59■□□□□ 0.73
MTHFRP42898 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
MTHFRP42898 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
MTHFRP42898 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.59■□□□□ 0.73
MTHFRP42898 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.59■□□□□ 0.73
MTHFRP42898 SLC25A6P4-201ENST00000586535 553 ntBASIC19.59■□□□□ 0.73
MTHFRP42898 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.59■□□□□ 0.73
MTHFRP42898 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.59■□□□□ 0.73
MTHFRP42898 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
MTHFRP42898 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.59■□□□□ 0.73
MTHFRP42898 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.59■□□□□ 0.73
MTHFRP42898 KRT8P7-201ENST00000533003 1432 ntBASIC19.59■□□□□ 0.73
MTHFRP42898 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MTHFRP42898 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 AFG3L1P-217ENST00000557444 2447 ntBASIC19.59■□□□□ 0.73
MTHFRP42898 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MTHFRP42898 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MTHFRP42898 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
MTHFRP42898 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
MTHFRP42898 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MTHFRP42898 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
MTHFRP42898 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.58■□□□□ 0.72
MTHFRP42898 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.58■□□□□ 0.72
MTHFRP42898 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.58■□□□□ 0.72
MTHFRP42898 AC079776.4-201ENST00000511039 504 ntBASIC19.58■□□□□ 0.72
MTHFRP42898 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.58■□□□□ 0.72
MTHFRP42898 AL121912.1-201ENST00000603683 238 ntBASIC19.58■□□□□ 0.72
MTHFRP42898 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
MTHFRP42898 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
MTHFRP42898 Z83836.1-201ENST00000624605 1642 ntBASIC19.58■□□□□ 0.72
MTHFRP42898 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MTHFRP42898 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.58■□□□□ 0.72
MTHFRP42898 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
MTHFRP42898 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.57■□□□□ 0.72
MTHFRP42898 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.57■□□□□ 0.72
MTHFRP42898 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
MTHFRP42898 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms