Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC020916.1-201ENST00000587762 1774 ntBASIC18.97■□□□□ 0.63
RPA3P35244 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.97■□□□□ 0.63
RPA3P35244 PRORSD1P-201ENST00000295112 541 ntBASIC18.97■□□□□ 0.63
RPA3P35244 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.97■□□□□ 0.63
RPA3P35244 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.97■□□□□ 0.63
RPA3P35244 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.97■□□□□ 0.63
RPA3P35244 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.97■□□□□ 0.63
RPA3P35244 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.97■□□□□ 0.63
RPA3P35244 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RPA3P35244 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPA3P35244 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.97■□□□□ 0.63
RPA3P35244 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RPA3P35244 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
RPA3P35244 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
RPA3P35244 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.96■□□□□ 0.63
RPA3P35244 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.96■□□□□ 0.63
RPA3P35244 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.96■□□□□ 0.63
RPA3P35244 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 AC004264.1-201ENST00000608354 794 ntBASIC18.96■□□□□ 0.63
RPA3P35244 FAM197Y4-202ENST00000622692 608 ntBASIC18.96■□□□□ 0.63
RPA3P35244 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPA3P35244 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RPA3P35244 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.96■□□□□ 0.63
RPA3P35244 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPA3P35244 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPA3P35244 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.95■□□□□ 0.62
RPA3P35244 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RPA3P35244 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.95■□□□□ 0.62
RPA3P35244 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPA3P35244 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.95■□□□□ 0.62
RPA3P35244 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RPA3P35244 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 RPPH1-201ENST00000516869 333 ntBASIC18.95■□□□□ 0.62
RPA3P35244 AC124016.1-201ENST00000609552 612 ntBASIC18.95■□□□□ 0.62
RPA3P35244 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RPA3P35244 TMEM191A-211ENST00000637163 1067 ntBASIC18.95■□□□□ 0.62
RPA3P35244 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.95■□□□□ 0.62
RPA3P35244 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPA3P35244 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.95■□□□□ 0.62
RPA3P35244 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPA3P35244 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
RPA3P35244 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.94■□□□□ 0.62
RPA3P35244 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RPA3P35244 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RPA3P35244 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.94■□□□□ 0.62
RPA3P35244 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.94■□□□□ 0.62
RPA3P35244 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.94■□□□□ 0.62
RPA3P35244 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.94■□□□□ 0.62
RPA3P35244 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RPA3P35244 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.94■□□□□ 0.62
RPA3P35244 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RPA3P35244 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.94■□□□□ 0.62
RPA3P35244 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
RPA3P35244 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPA3P35244 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.93■□□□□ 0.62
RPA3P35244 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPA3P35244 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms