Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA3P32297 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA3P32297 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA3P32297 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA3P32297 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA3P32297 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA3P32297 TSPY15P-201ENST00000457163 923 ntBASIC19.78■□□□□ 0.76
CHRNA3P32297 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNA3P32297 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNA3P32297 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.78■□□□□ 0.76
CHRNA3P32297 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA3P32297 AC073912.3-201ENST00000624414 853 ntBASIC19.78■□□□□ 0.76
CHRNA3P32297 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA3P32297 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA3P32297 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHRNA3P32297 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHRNA3P32297 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNA3P32297 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHRNA3P32297 NOC2LP1-202ENST00000452600 2235 ntBASIC19.78■□□□□ 0.76
CHRNA3P32297 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNA3P32297 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 KRT16P1-201ENST00000399124 1418 ntBASIC19.77■□□□□ 0.76
CHRNA3P32297 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA3P32297 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CHRNA3P32297 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA3P32297 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA3P32297 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 BX088651.1-201ENST00000540551 451 ntBASIC19.77■□□□□ 0.76
CHRNA3P32297 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA3P32297 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNA3P32297 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNA3P32297 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNA3P32297 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA3P32297 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.77■□□□□ 0.75
CHRNA3P32297 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA3P32297 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA3P32297 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHRNA3P32297 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHRNA3P32297 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHRNA3P32297 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 NUDT16P1-203ENST00000513809 620 ntBASIC19.76■□□□□ 0.75
CHRNA3P32297 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA3P32297 REXO1L12P-201ENST00000622156 912 ntBASIC19.76■□□□□ 0.75
CHRNA3P32297 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA3P32297 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 AC018470.1-201ENST00000624790 3129 ntBASIC19.76■□□□□ 0.75
CHRNA3P32297 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA3P32297 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CHRNA3P32297 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CHRNA3P32297 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHRNA3P32297 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.76■□□□□ 0.75
CHRNA3P32297 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms