Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HOXC8P31273 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXC8P31273 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXC8P31273 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXC8P31273 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HOXC8P31273 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXC8P31273 AP000867.3-201ENST00000524675 377 ntBASIC20.47■□□□□ 0.87
HOXC8P31273 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXC8P31273 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HOXC8P31273 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 MTMR9LP-203ENST00000426597 1545 ntBASIC20.47■□□□□ 0.87
HOXC8P31273 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXC8P31273 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC8P31273 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HOXC8P31273 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HOXC8P31273 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HOXC8P31273 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXC8P31273 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC8P31273 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HOXC8P31273 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXC8P31273 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.46■□□□□ 0.87
HOXC8P31273 AC104692.2-201ENST00000603054 253 ntBASIC20.46■□□□□ 0.87
HOXC8P31273 AC024563.2-201ENST00000603282 481 ntBASIC20.46■□□□□ 0.87
HOXC8P31273 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXC8P31273 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC8P31273 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC8P31273 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC8P31273 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXC8P31273 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HOXC8P31273 AC233702.3-201ENST00000578656 1387 ntBASIC20.46■□□□□ 0.87
HOXC8P31273 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HOXC8P31273 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
HOXC8P31273 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HOXC8P31273 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC8P31273 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC8P31273 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXC8P31273 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 AL357033.4-201ENST00000617703 1807 ntBASIC20.45■□□□□ 0.86
HOXC8P31273 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HOXC8P31273 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.45■□□□□ 0.86
HOXC8P31273 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXC8P31273 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HOXC8P31273 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
HOXC8P31273 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.44■□□□□ 0.86
HOXC8P31273 KRT18P31-201ENST00000506277 1292 ntBASIC20.44■□□□□ 0.86
HOXC8P31273 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.44■□□□□ 0.86
HOXC8P31273 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC8P31273 AL121772.3-201ENST00000610840 674 ntBASIC20.44■□□□□ 0.86
HOXC8P31273 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.44■□□□□ 0.86
HOXC8P31273 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HOXC8P31273 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HOXC8P31273 KRT8P10-201ENST00000450021 1447 ntBASIC20.44■□□□□ 0.86
HOXC8P31273 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HOXC8P31273 AL032819.2-201ENST00000624543 2162 ntBASIC20.44■□□□□ 0.86
HOXC8P31273 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.43■□□□□ 0.86
HOXC8P31273 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HOXC8P31273 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
HOXC8P31273 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HOXC8P31273 IGHV3-47-201ENST00000425060 335 ntBASIC20.43■□□□□ 0.86
HOXC8P31273 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.43■□□□□ 0.86
HOXC8P31273 EMBP1-201ENST00000458200 901 ntBASIC20.43■□□□□ 0.86
HOXC8P31273 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms